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SNAP


NAR Molecular Biology Database Collection entry number 1011
S. Li1,2, L. Ma2,3, H. Li1,2, S. Vang4, Y. Hu2, L. Bolund1,2 and J. Wang1,2,5
1The Institute of Human Genetics, University of Aarhus, DK-8000 Aarhus C., Denmark
2Beijing Genomics Institute (BGI), Chinese Academy of Sciences (CAS), Beijing Airport Industrial Zone B-6, Beijing 101300, China
3Graduate University of the Chinese Academy of Sciences, Yuquan Road 19A, Beijing 100049, China
4Research Unit for Molecular Medicine, Aarhus University Hospital and Faculty of Health Sciences, DK-8200 Aarhus N., Denmark
5College of Life Sciences, Peking University, Beijing 100871, China

Database Description

SNAP (Single Nucleotide Polymorphism Annotation Platform) is a server designed to comprehensively analyze single genes and relationships between genes basing on SNPs in the human genome. The aim of the platform is to facilitate the study of SNP finding and analysis within the framework of medical research. Using a user-friendly web interface, genes can be searched by name, description, position, SNP ID or clone name. Several public databases are integrated, including gene information from Ensembl, protein features from Uniprot/SWISSPROT, Pfam, and DAS-CBS. Gene relationships are fetched from BIND, MINT, KEGG and are integrated with ortholog data from TreeFam to extend the current interaction networks. Integrated tools for primer design and mis-splicing analysis have been developed to facilitate experimental analysis of individual genes with focus on their variation. Snap is available at http://snap.humgen.au.dk and http://snap.genomics.org.cn.


Go to the abstract in the NAR 2007 Database Issue.
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