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DRTF


NAR Molecular Biology Database Collection entry number 1156
Gao G, Zhong Y, Guo A, Zhu Q, Tang W, Zheng W, Gu X, Wei L, Luo J.
Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, College of Life Sciences, Peking University Beijing 100871, People's Republic of China

Database Description

DRTF contains 2025 putative transcription factors (TFs) in Oryza sativa L. ssp. indica and 2384 in ssp. japonica, distributed in 63 families, identified by computational prediction and manual curation. It includes detailed annotations of each TF including sequence features, functional domains, Gene Ontology assignment, chromosomal localization, EST and microarray expression information, as well as multiple sequence alignment of the DNA-binding domains for each TF family. The database can be browsed and searched with a user-friendly web interface. DRTF is available at http://drtf.cbi.pku.edu.cn

Acknowledgements

This study was supported by domestic grants: 2003CB715900 (973), 90408015 (NSFC) and the 863 Programme.

References

Gao, G., Zhong, Y., Guo, A., Zhu, Q., Tang, W., Zheng, W., Gu, X., Wei, L. and Luo, J. (2006) DRTF: a database of rice transcription factors. Bioinformatics 2006, 22(10):1286-1287.

Category: Plant databases
Subcategory: Rice

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