ELM
NAR Molecular Biology Database Collection entry number 187
Dinkel, Holger; Michael, Sushama; Weatheritt, Robert; Davey, Norman; Roey, Kim; Altenberg, Brigitte; Toedt, Grischa; Uyar, Bora.; Seiler, Markus; Budd, Aidan; Jödicke, Lisa; Dammert, Marcel; Schroeter, Christian; Hammer, Maria; Jehl, Peter; McGuigan, Caroline; Dymecka, Magdalene; Chica, Claudia,; Luck, Katja; Via, Allegra; Chatr-Aryamontri, Andrew; Haslam, Niall; Grebnev, Gleb; Edwards, Richard; Steinmetz, Michel; Diella, Francesca; Gibson, Toby
Contact toby.gibson@embl.de
Database Description
PhosphoBase is a database of experimentally verified phosphorylation sites and associated protein kinases. The data are collected from literature and the SwissProt database and stored in a relational SQL database. Version 3.0 contains 1766 phosphorylated residues with 1310 protein kinase annotations. PhosphoBase is available on the World Wide Web from the CBS Server at http://www.cbs.dtu.dk/databases/PhosphoBase
References
1. Diella F, Cameron S, Gemünd C, Linding R, Via A, Kuster B, Sicheritz-Pontén T, Blom N, Gibson TJ. (2004) Phospho.ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins. BMC Bioinformatics 5:79
2. Diella F, Gould CM, Chica C, Via A, Gibson TJ. (2007) Phospho.ELM: a database of phosphorylation sites update 2008. Nucleic Acids Res. Epub Oct 25, 2007
2. Diella F, Gould CM, Chica C, Via A, Gibson TJ. (2007) Phospho.ELM: a database of phosphorylation sites update 2008. Nucleic Acids Res. Epub Oct 25, 2007
Category: Protein sequence databases
Subcategory: Protein sequence motifs and active sites
Go to the abstract in the NAR 2008 Database Issue.
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