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TransMembrane Protein DataBase


NAR Molecular Biology Database Collection entry number 589
Ikeda M., Arai M., Okuno T. and Shimizu T.
Department of Electronic Information System Engineering, Faculty of Science and Technology, Hirosaki University, Hirosaki 036-8561, Japan.

Database Description

TransMembrane Protein DataBase, TMPDB (http://bioinfo.si.hirosaki-u.ac.jp/~TMPDB/) is a collection of transmembrane proteins with topologies based on definite experimental evidences such as X-ray crystallography, NMR, gene fusion technique, substituted cysteine accessibility method, Asp(N)-linked glycosylation experiment and other biochemical methods. TMPDB would serve the requirements of both bioinformaticians and biologists, as a test and/or training dataset, for improving the existing TM topology prediction methods and developing novel prediction methods with higher performance as well as for making better understanding of TM proteins physicochemically.


Go to the abstract in the NAR 2003 Database Issue.
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