RNAi codex

NAR Molecular Biology Database Collection entry number 862
Olson A., Sheth N., Lee J.S., Hannon G. and Sachidanandam R.
Cold Spring Harbor Laboratory, PO Box 100, Cold Spring Harbor, NY 11724, USA

Database Description

RNAi Codex consists of a database of shRNA related information and an associated website. It has been developed as a portal for publicly available short-hairpin RNA (shRNA) resources and is accessible at http://codex.cshl.org. RNAi Codex currently holds data from the Hannon-Elledge shRNA library and allows the use of biologist-friendly gene names to access information on shRNA constructs that can silence the gene of interest. It is designed to hold user-contributed annotations and publications for each construct, as and when such data become available. RNAi Codex relies upon GeneSeer (http://geneseer.cshl.org) to handle gene names and has a variety of mapping information on genes, coding sequences and the location of the target sequences on the mRNA.

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