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GenomeRNAi


NAR Molecular Biology Database Collection entry number 989
Horn T., Arziman Z., Berger J. and Boutros M.
German Cancer Research Center, Signaling and Functional Genomics, 69120 Heidelberg, Germany

Database Description

GenomeRNAi is a database of phenotypes from systematic RNA interference (RNAi) screens in cultured Drosophila cells. The phenotype database can be searched by gene identifiers, RNAi probe identifiers as well as with Drosophila nucleotide or protein sequences. Searches with homologous sequences from human or C. elegans are also possible. Integrated tools evaluate the specificity of long double-stranded RNAs (RNAi probes) by similarity searches against all predicted Drosophila transcripts. This site can also be used to identify pre-designed RNAi probes from available Drosophila RNAi libraries.

Acknowledgements

Funding is provided by the Human Frontiers Science Program, the European Commission and the Deutsche Forschungsgemeinschaft

References

1. Horn T., Arziman Z., Berger J., Boutros M. (2007). GenomeRNAi: A Database for cell-based RNAi Phenotypes. Nucleic Acids Res. 35: in press


Go to the abstract in the NAR 2010 Database Issue.
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