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primers4clades

NAR Web Server Collection entry number 10554
Contact   vinuesa@ccg.unam.mx

Description

Primers4clades is a web server that uses phylogenetic trees to design primers to amplify novel sequences from across species using metagenomic DNA or from uncharacterized organisms. Beginning with a set of non-aligned protein coding genes, primers4clades aligns the sequences, computes a neighbor-joining tree and designs lineage specific primers for the user selected species or sequence clusters.

Classification

Category: DNA
Subcategory: Tools For the Bench
Category: Protein

PubMed Abstract

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