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miRanalyzer

NAR Web Server Collection entry number 10593

Description

miRanalyzer is a web server tool for the analysis of high throughput sequencing experiments for microRNAs. Users input a list of unique reads and copy number. The tool detects all known microRNA sequences annotated in miRBase, finds perfect matches in other libraries of transcribed sequences and predicts new microRNAs. Alignments are based on Bowtie and differences between plant and animal microRNAs are accounted for in prediction.

Classification

Category: Expression
Subcategory: Gene Regulation
Category: RNA
Subcategory: Functional RNAs

PubMed Abstract

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