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RegPrecise

NAR Web Server Collection entry number 11635

Description

The RegPrecise database was developed for capturing, visualization and analysis of predicted transcription factor regulons in prokaryotes that were reconstructed and manually curated by utilizing the comparative genomic approach. The reconstructed regulons include transcription factors, their cognate DNA motifs and regulated genes/operons linked to the candidate transcription factor binding sites. The RegPrecise allows for browsing the regulon collections for: (i) conservation of DNA binding sites and regulated genes for a particular regulon across diverse taxonomic lineages; (ii) sets of regulons for a family of transcription factors; (iii) repertoire of regulons in a particular taxonomic group of species; (iv) regulons associated with a metabolic pathway or a biological process in various genomes. Another section in the database represents the results of accurate regulon propagation to the closely related genomes.

Classification

Category: DNA
Subcategory: Databases
Category: Model Organisms
Subcategory: Databases

PubMed Abstract

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