SPRING
NAR Web Server Collection entry number 1450
Contact cllu@mail.nctu.edu.tw
Description
Sorting Permutation by Reversals and Block Interchanges (SPRING) is a tool for the analysis of genome rearrangements. SPRING takes two or more chromosomes as its input and then computes a minimum series of reversals and/or block-interchanges for transforming one chromosome into another. Phylogenetic trees based on the rearrangement analysis are also shown as part of the results.
Classification
Category: DNA
Subcategory: Phylogeny Reconstruction
Category: Sequence Comparison
Subcategory: Comparative Genomics
PubMed Abstracts
PMID: 16845100
PMID: 15814563
PMID: 15725736
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