Skip Navigation

BEARR

NAR Web Server Collection entry number 9264

Description

Batch Extraction and Analysis of cis-Regulatory Regions (BEARR) takes a list of gene identifiers (such as RefSeq and Unigene IDs), consensus patterns, and (optionally) a position weight matrix as input and returns a list of matches for the patterns in both the sense and anti-sense strands of the relevant genomic sequence. The user specifies what distance up and downstream from both the transcription start site and the 3\' terminus to look for the patterns.

Classification

Category: DNA
Category: Expression
Subcategory: Gene Regulation
Category: Expression
Category: Human Genome
Subcategory: Other Resources
Category: Model Organisms
Subcategory: Mouse and Rat

PubMed Abstract

Oxford University Press is not responsible for the content of external internet sites