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neXtProt


NAR Molecular Biology Database Collection entry number 1459
Gaudet, Pascale; Michel, Pierre-Andre; Zahn-Zabal, Monique; Britan, Aurore, Cusin, Isabelle; Hinard, Valérie, Duek Roggli, Paula; Gateau, Alain; Gleizes, Anne; Nikitin, Frédéric, Rech de Laval, Valentine; Schaeffer, Mathieu, Teixeira, Daniel; Lane, Lydie; Bairoch, Amos

Database Description

neXtProt (http://www.nextprot.org) is a human protein-centric knowledgebase developed at the SIB Swiss Institute of Bioinformatics. Focused solely on human proteins, neXtProt aims to provide a state-of the art resource for the representation of human biology by capturing a wide range of data, precise annotations, fully traceable data provenance and a web interface which enables researchers to find and view information in a comprehensive manner. Data can also be accessed via a programmatic interface (https://api.nextprot.org/) and a SPARQL endpoint (http://snorql.nextprot.org/).

References

Gaudet P, Michel PA, Zahn-Zabal M, Cusin I, Duek PD, Evalet O, Gateau A, Gleizes A, Pereira M, Teixeira D, Zhang Y, Lane L, Bairoch A. The neXtProt knowledgebase on human proteins: current status. Nucleic Acids Res. 2015 Jan;43(Database issue):D764-70. doi:10.1093/nar/gku1178
Gaudet P, Argoud-Puy G, Cusin I, Duek P, Evalet O, Gateau A, Gleizes A, Pereira M, Zahn-Zabal M, Zwahlen C, Bairoch A, Lane L. neXtProt: organizing protein knowledge in the context of human proteome projects. J Proteome Res. 2013 Jan 4;12(1):293-8. doi:10.1021/pr300830v
Lane L, Argoud-Puy G, Britan A, Cusin I, Duek PD, Evalet O, Gateau A, Gaudet P, Gleizes A, Masselot A, Zwahlen C, Bairoch A. neXtProt: a knowledge platform for human proteins. Nucleic Acids Res. 2012 Jan;40(Database issue):D76-83. doi:10.1093/nar/gkr1179

Subcategory: Human ORFs

Go to the abstract in the NAR 2015 Database Issue.
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