NAR Molecular Biology Database Collection entry number 820
Kostadinov R., Malhotra N., Viotti M., Shine R., Dâ€™Antonio L. and Bagga P.
Bioinformatics, School of Theoretical and Applied Science, Ramapo College of New Jersey, Mahwah, NJ 07430, USA
GRSDB: â€˜Gâ€™-Rich Sequences DataBase contains information on composition and distribution of putative Quadruplex forming 'G'-Rich Sequences (QGRS) in the alternatively processed (alternatively spliced or alternatively polyadenylated) mammalian pre-mRNA sequences. The data stored in the GRSDB is based on computational analysis of genomic nucleotide sequences obtained from fully annotated GenBank/RefSeq entries that provide alternative processing information. In addition to providing data on composition and locations of QGRS relative to the processing sites in the pre-mRNA sequence, GRSDB features visual comparison of QGRS distribution patterns among all the alternative RNA products of a gene with the help of dynamically generated graphics. . GRSDB can be accessed at http://bioinformatics.ramapo.edu/grsdb/.
This project was funded in part by grants from the Provost Office and TLTR (The Teaching, Learning and Technology Roundtable) of Ramapo College of New Jersey.
Category: RNA sequence databases
Category: Structure Databases
Subcategory: Nucleic acid structure
Go to the abstract in the NAR 2008 Database Issue.
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